Howdy folks. Just passing through and couldn't help but read some of this thread. Hopefully I can shed some light on some questions...
Creature Commandos: If you recall, waaay back in COUNTDOWN TO INFINITE CRISIS, we saw on a computer screen that Project M was a sub-division of Checkmate, along with Task Force X and the Omacs. So we are just following that through here. It's not as out of left field as it seems.
Wonder Woman: JLGL is absolutely tying into what is going on in WONDER WOMAN. In WW, we know that the Amazons are on the lam, and trying to hide Diana from that. (And if you're not reading the "Odyssey" arc in WW...well, that's a shame, 'cuz there's some good stuff going on there. I'm biased 'cuz I edit it, but I firmly stand behind what we're trying to do.) As a result of this skewed reality, none of the DCU heroes have met Diana before now. It seems only Max, Booster, Fire, Ice and Captain Atom can remember the way reality used to be. We'll also see Superman meet Diana for the "first" time in SUPERMAN #708 in February.
Hope this helps. I'm pretty psyched for you guys to read the rest of the series!
BC